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1.
Chemosphere ; 355: 141796, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38537711

RESUMO

Polycyclic aromatic hydrocarbons (PAHs) are pervasive ecological pollutants produced essentially during the inadequate burning of organic materials. PAHs are a group of different organic compounds that are made out of various aromatic rings. PAHs pose a serious risk to humans and aquatic ecosystems because of their mutagenic and carcinogenic properties. In this way, there is a critical prerequisite to utilizing successful remediation strategies and methods to limit the dangerous effect of these pollutants on the ecosystem. Biochar has believed of intriguing properties such as simple manufacturing operations and more affordable and more productive materials. Biochar is a sustainable carbonaceous material that has an enormous surface area with bountiful functional groups and pore structure, which has huge potential for the remediation of toxic pollutants. This review emphasizes the occurrence, development, and fate of toxic PAHs in the environment. In the present review, the properties and role of biochar in the removal of PAHs were illustrated, and the influencing factors and an efficient key mechanism of biochar for the remediation of PAHs were discussed in detail. Various surface modification methods can be utilized to improve the biochar properties with the magnetization process; the advancements of modified biochar are pointed out in this review. Finally, the constraints and prospects for the large-scale application of biochar in the remediation of toxic pollutants are highlighted.


Assuntos
Poluentes Ambientais , Hidrocarbonetos Policíclicos Aromáticos , Poluentes do Solo , Humanos , Hidrocarbonetos Policíclicos Aromáticos/análise , Ecossistema , Carvão Vegetal/química , Poluentes do Solo/química , Solo/química
2.
Fish Shellfish Immunol ; 147: 109459, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38369068

RESUMO

Probiotics in shrimp aquaculture have gained considerable attention as a potential solution to enhance production efficiency, disease management, and overall sustainability. Probiotics, beneficial microorganisms, have shown promising effects when administered to shrimp as dietary supplements or water additives. Their inclusion has been linked to improved gut health, nutrient absorption, and disease resistance in shrimp. Probiotics also play a crucial role in maintaining a balanced microbial community within the shrimp pond environment, enhancing water quality and reducing pathogen prevalence. This article briefly summarizes the many ways that probiotics are used in shrimp farming and the advantages that come with them. Despite the promising results, challenges such as strain selection, dosage optimization, and environmental conditions are carefully addressed for successful probiotic integration in shrimp aquaculture. The potential of probiotics as a sustainable and ecologically friendly method of promoting shrimp development and health while advancing environmentally friendly shrimp farming techniques is highlighted in this analysis. Further research is required to fully exploit probiotics' benefits and develop practical guidelines for their effective implementation in shrimp aquaculture.


Assuntos
Penaeidae , Probióticos , Animais , Crustáceos , Aquicultura/métodos , Alimentos Marinhos , Qualidade da Água
3.
Chemosphere ; 350: 141123, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38185426

RESUMO

Pollution is a global menace that poses harmful effects on all the living ecosystems and to the Earth. As years pass by, the available and the looming rate of pollutants increases at a faster rate. Although many treatments and processing strategies are waged for treating such pollutants, the by-products and the wastes or drain off generated by these treatments further engages in the emission of hazardous waste. Innovative and long-lasting solutions are required to address the urgent global issue of hazardous pollutant remediation from contaminated environments. Myco-remediation is a top-down green and eco-friendly tool for pollution management. It is a cost-effective and safer practice of converting pernicious substances into non-toxic forms by the use of fungi. But these pollutants can be transformed into useable products along with multiple benefits for the environment such as sequestration of carbon emissions and also to generate high valuable bioactive materials that fits as a sustainable economic model. The current study has examined the possible applications of fungi in biorefineries and their critical role in the transformation and detoxification of pollutants. The paper offers important insights into using fungal bioremediation for both economically and environmentally sound solutions in the domain of biorefinery applications by combining recent research findings.


Assuntos
Poluentes Ambientais , Biodegradação Ambiental , Ecossistema , Resíduos Perigosos
4.
Sci Total Environ ; 904: 166563, 2023 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-37647970

RESUMO

The growing concentrations of micropollutants in aquatic ecosystems are a global water quality issue. Understanding micropollutants varied chemical composition and potency is essential to solving this complex issue. Micropollutants management requires identifying contaminants to reduce, optimal reduction targets, and the best wastewater recycling locations. Management requires appropriate technological measures. Pharmaceuticals, antibiotics, hormones, and other micropollutants can enter the aquatic environment from point and diffuse sources, with wastewater treatment plants (WWTPs) distributing them in urban areas. Micropollutants like pharmaceuticals and hormones may not be removed by conventional WWTPs. Micropollutants affect the EU, especially in densely populated areas where surface water is consumed. This review examines several technological options that can be integrated into existing treatment methods to address this issue. In this work, oxidation, activated carbon, and their combinations as potential solutions, considering their efficacy and cost were evaluated. This study illuminates micropollutants origin and physico-chemical properties, which affect distribution, persistence, and environmental impacts. Understanding these factors helps us develop targeted micropollutant mitigation strategies to protect water quality. This review can inform policy and decision-making to reduce micropollutant impacts on aquatic ecosystems and human health.


Assuntos
Poluentes Químicos da Água , Purificação da Água , Humanos , Eliminação de Resíduos Líquidos/métodos , Ecossistema , Relação Quantitativa Estrutura-Atividade , Poluentes Químicos da Água/análise , Águas Residuárias , Purificação da Água/métodos , Hormônios , Preparações Farmacêuticas
5.
Biotechnol Bioprocess Eng ; 27(4): 543-555, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36092682

RESUMO

Antibiotic overuse has resulted in the microevolution of drug-tolerant bacteria. Understandably it has become one of the most significant obstacles of the current century for scientists and researchers to overcome. Bacteria have a tendency to form biofilm as a survival mechanism. Biofilm producing microorganism become far more resistant to antimicrobial agents and their tolerance to drugs also increases. Prevention of biofilm development and curbing the virulency factors of these multi drug resistant or tolerant bacterial pathogens is a newly recognised tactic for overcoming the challenges associated with such bacterial infections and has become a niche to be addressed. In order to inhibit virulence and biofilm from planktonic bacteria such as, Pseudomonas aeruginosa, Acinetobacter baumannii, and others, stable nanoemulsions (NEs) of essential oils (EOs) and their bioactive compounds prove to be an interesting solution. These NEs demonstrated significantly greater anti-biofilm and anti-virulence activity than commercial antibiotics. The EO reduces disease-causing gene expression, which is required for pathogenicity, biofilm formation and attachment to the surfaces. Essential NE and NE-loaded hydrogel surface coatings demonstrates superior antibiofilm activity which can be employed in healthcare-related equipments like glass, plastic, and metal chairs, hospital beds, ventilators, catheters, and tools used in intensive care units. Thus, anti-virulence and anti-biofilm forming strategies based on NEs-loaded hydrogel may be used as coatings to combat biofilm-mediated infection on solid surfaces.

6.
Bioresour Technol ; 359: 127421, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-35690237

RESUMO

In a moving bed-biofilm reactor (MBBR), the fluidization efficiency, immobilization of microbial cells, and treatment efficiency are directly influenced by the shape and pores of biofilm carriers. Moreover, the efficacy of bioremediation mainly depends on their interaction interface with microbes and substrate. This review aims to comprehend the role of different carrier properties such as material shapes, pores, and surface area on bioremediation productivity. A porous biofilm carrier with surface ridges containing spherical pores sizes > 1 mm can be ideal for maximum efficacy. It provides diverse environments for cell cultures, develops uneven biofilms, and retains various cell sizes and biomass. Moreover, the thickness of biofilm and controlled scaling shows a significant impact on MBBR performance. Therefore, the effect of these parameters in MBBR is discussed detailed in this review, through which existing literature and technical strategies that focus on the surface area as the primary factor can be critically assessed.


Assuntos
Biofilmes , Purificação da Água , Biomassa , Reatores Biológicos , Interações Microbianas , Eliminação de Resíduos Líquidos , Águas Residuárias/análise
7.
Saudi J Biol Sci ; 29(4): 2033-2046, 2022 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-35531220

RESUMO

Background: The world population is continuously growing. It has been estimated that half of the world's population is from the Asian continent, mainly from China and India. Overpopulation may lead to many societal problems as well as to changes in the habitat. Birth control measures are thus needed to control this growth. However, for the last 50-60 years, there have not been any improvements in the field of contraception. Nevertheless, the immunocontraceptive vaccine is an emerging field, and it might be the only replacement for the existing mode of contraception for the next millennium. Sexually transmitted infections (STIs) are frequent, and their transmission rate increases yearly. As antibiotics are the prevailing treatment for this kind of infections, resistance in humans has increased; therefore, having effective antibiotic treatments for STIs is now a concern. Vaccines against STIs are now needed. It is thought that the improvements in the fields of proteomics, immunomics, metabolomics, and other omics will help in the successful development of vaccines. Objective: To collect and review the literature about recent advancements in immunocontraception and vaccines against sexually transmitted diseases/infections. Methods: Reliable scientific databases, such as PubMed Central, PubMed, Scopus, Science Direct, and Goggle Scholar, were consulted. Publications bearing important information on targeted antigens/immunogens for contraceptive vaccine design and advancements in vaccine development for STIs were gathered and tabulated, and details were analyzed as per the theme of each study. Results: Important antigens that have a specific role in fertility have been studied extensively for their contraceptive nature. Additionally, the advancements in the screening for the best antigens, according to their antigenic nature and how they elicit immune responses for an extended period were also studied. Herd immunity for STIs and advancements in the development of vaccines for syphilis, gonorrhea, and herpes simplex virus were also studied and tabulated in this review. An extensive knowledge on STIs vaccines was gained. Conclusion: This extensive review is aimed to provide insights for active researchers in vaccinology, immunology, and reproductive biology. Advancements in the development of vaccines for different STIs can be gathered as a wholesome report.

8.
Bioresour Technol ; 355: 127234, 2022 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-35489575

RESUMO

Biogas generation using food waste anaerobic co-digestion with activated sludge provides a cleaner addressable system, an excellent solution to global challenges, the increasing energy demands, fuel charges, pollution and wastewater treatment. Regardless of the anaerobic digestate end product values, the technology lacks efficiency and process instability due to substrate irregularities. Process parameters and substrate composition, play a vital role in the efficiency and outcome of the system. Intrinsic biochar properties such as pore size, specific surface properties and cation exchange capacity make it an ideal additive that enriches microbial functions and enhances anaerobic digestion. The pretreatment and co-digestion of food waste and activated sludge are found to be significant for efficient biogas generation. The advantages, drawbacks, limitations, and technical improvements are covered extensively in the present review besides the recent advancement in the anaerobic digestion system.


Assuntos
Eliminação de Resíduos , Esgotos , Anaerobiose , Biocombustíveis/análise , Reatores Biológicos , Alimentos , Metano , Esgotos/química
9.
Comput Math Methods Med ; 2022: 7137524, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35178119

RESUMO

Image fusion can be performed on images either in spatial domain or frequency domain methods. Frequency domain methods will be most preferred because these methods can improve the quality of edges in an image. In image fusion, the resultant fused images will be more informative than individual input images, thus more suitable for classification problems. Artificial intelligence (AI) algorithms play a significant role in improving patient's treatment in the health care industry and thus improving personalized medicine. This research work analyses the role of image fusion in an improved brain tumour classification model, and this novel fusion-based cancer classification model can be used for personalized medicine more effectively. Image fusion can improve the quality of resultant images and thus improve the result of classifiers. Instead of using individual input images, the high-quality fused images will provide better classification results. Initially, the contrast limited adaptive histogram equalization technique preprocess input images such as MRI and SPECT images. Benign and malignant class brain tumor images are applied with discrete cosine transform-based fusion method to obtain fused images. AI algorithms such as support vector machine classifier, KNN classifier, and decision tree classifiers are tested with features obtained from fused images and compared with the result obtained from individual input images. Performances of classifiers are measured using the parameters accuracy, precision, recall, specificity, and F1 score. SVM classifier provided the maximum accuracy of 96.8%, precision of 95%, recall of 94%, specificity of 93%, F1 score of 91%, and performed better than KNN and decision tree classifiers when extracted features from fused images are used. The proposed method results are compared with existing methods and provide satisfactory results.


Assuntos
Algoritmos , Neoplasias Encefálicas/classificação , Neoplasias Encefálicas/diagnóstico por imagem , Aumento da Imagem/métodos , Aprendizado de Máquina , Biologia Computacional , Bases de Dados Factuais/estatística & dados numéricos , Árvores de Decisões , Detecção Precoce de Câncer/métodos , Detecção Precoce de Câncer/estatística & dados numéricos , Humanos , Imagem Multimodal/métodos , Imagem Multimodal/estatística & dados numéricos , Redes Neurais de Computação , Neuroimagem/métodos , Neuroimagem/estatística & dados numéricos , Medicina de Precisão/métodos , Medicina de Precisão/estatística & dados numéricos , Máquina de Vetores de Suporte
10.
Bioresour Technol ; 344(Pt A): 126171, 2022 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-34695586

RESUMO

The need to develop sustainable alternatives for pretreatment and hydrolysis of lignocellulosic biomass (LCB) is a massive concern in the industrial sector today. Breaking down of LCB yields sugars and fuel in the bulk scale. If explored under nanotechnology, LCB can be refined to yield high-performance fuel sources. The toxicity and cost of conventional methods can be reduced by applying nanoparticles (NPs) in refining LCB. Immobilization of enzymes onto NPs or used in conjugation with nanomaterials would instill specific and eco-friendly options for hydrolyzing LCB. Nanomaterials increase the proficiency, reusability, and stability of enzymes. Notably, magnetic NPs have bagged their place in the downstream processing of LCB effluents due to their efficient separation and cost-effectiveness. The current review highlights the role of nanotechnology and its particles in refining LCB into various commercial precursors and value-added products. The relationship between nanotechnology and LCB refinery is portrayed effectively in the present study.


Assuntos
Biocombustíveis , Lignina , Biomassa , Hidrólise , Nanotecnologia
11.
J Biomol Struct Dyn ; 40(9): 3979-3988, 2022 06.
Artigo em Inglês | MEDLINE | ID: mdl-34043937

RESUMO

Prostasomes, a secretory particle from prostate gland in human seminal fluid plays a role in enhancing the fertility and its absence or less presence will lead to male infertility. Very few fertility associated proteins were detected in prostasomes. In order to isolate the prostasomes from ejaculated semen, the characterization was done using biochemical, molecular and in silico methods. The objective of current work on prostasomes is to identify a novel protein biomarker for the diagnosis and prognosis of male infertility. Semen samples were collected, primary semen analysis was done and prostasomes were isolated from ejaculated semen of fertile and infertile categories. Biochemical parameters like protein content, total antioxidant capacity, cholesterol content were evaluated in prostasomes. The critical expressed protein was identified by using SDS page and MALDI TOF techniques. Isolated particle from the semen samples was confirmed as prostasomes from SEM analysis and particle size analyzer. In MALDI results, the maximum hit was obtained against Clusterin that been reported to be involved in capacitation and motility of sperm. Structural modeling and molecular dynamics were carried out on Clusterin and elucidate the structural insights in the dynamic system. Overall, our study reported the novel biomarker Clusterin in prostasomes for diagnosis and prognosis of male infertility.Communicated by Ramaswamy H. Sarma.


Assuntos
Clusterina , Infertilidade Masculina , Biomarcadores/metabolismo , Clusterina/metabolismo , Humanos , Infertilidade Masculina/diagnóstico , Infertilidade Masculina/metabolismo , Masculino , Prognóstico , Próstata/metabolismo , Sêmen/metabolismo
12.
Environ Res ; 204(Pt A): 111968, 2022 03.
Artigo em Inglês | MEDLINE | ID: mdl-34453898

RESUMO

The changes in lifestyle and living conditions have affected not only humans but also microorganisms. As man invents new drugs and therapies, pathogens alter themselves to survive and thrive. Multiple drug resistance (MDR) is the talk of the town for decades now. Many generations of medications have been termed useless as MDR rises among the infectious population. The surge in nanotechnology has brought a new hope in reducing this aspect of resistance in pathogens. It has been observed in several laboratory-based studies that the use of nanoparticles had a synergistic effect on the antibiotic being administered to the pathogen; several resistant strains scummed to the stress created by the nanoparticles and became susceptible to the drug. The major cause of resistance to date is the efflux system, which makes the latest generation of antibiotics ineffective without reaching the target site. If species-specific nanomaterials are used to control the activity of efflux pumps, it could revolutionize the field of medicine and make the previous generation resistant medications active once again. Therefore, the current study was devised to assess and review nanoparticles' role on efflux systems and discuss how specialized particles can be designed towards an infectious host's particular drug ejection systems.


Assuntos
Proteínas de Membrana Transportadoras , Nanoestruturas , Antibacterianos/farmacologia , Resistência a Múltiplos Medicamentos , Humanos , Especificidade da Espécie
13.
Front Med (Lausanne) ; 8: 723019, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34926486

RESUMO

Semen parameters are been found as a key factor to evaluate the count and morphology in the given semen sample. The deep knowledge of male infertility will unravel with semen parameters correlated with molecular and biochemical parameters. The current research study is to identify the motility associated protein and its structure through the in-silico approach. Semen samples were collected and initial analysis including semen parameters was analyzed by using the World Health Organization protocol. Semen biochemical parameters, namely, seminal plasma protein concentration, fructose content, and glucosidase content were calculated and evaluated for correlation. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF) were carried out for identification of Septin-4 presence in the semen sample. Mascot search was done for protein conformation and in-silico characterization of Septin-4 by structural modeling in Iterative Threading Assembly Refinement (I-TASSER). Twenty-five nanoseconds molecular dynamics (MD) simulations results showed the stable nature of Septin-4 in the dynamic system. Overall, our results showed the presence of motility-associated protein in normospermia and control samples and not in the case of asthenospermia and oligoasthenospermia. Molecular techniques characterized the presence of Septin-4 and as a novel biomarker for infertility diagnosis.

14.
Saudi J Biol Sci ; 28(12): 7281-7289, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34867032

RESUMO

Biological synthesis of silver nanoparticles (AgNPs) by Cheatomorpha antennia and its in vitro and in vivo antibacterial activity against Vibrio harveyi in Macrobrachium rosenbergii was demonstrated in the study. In vitro growth curve analysis, cell viability and bacterial inhibitory assays were performed to test the efficacy of synthesised AgNPs against bacteria. Sodium caseinate was used as an encapsulating agent to deliver the antibacterial drugs and the commercial process of microencapsulation comprises the antibacterial bioelements for oral administration to improve the disease resistance of AgNPs against V. harveyi due to the eco-friendly for non-toxic behaviour of nanoparticle and their treatment. Characterisation of antibacterial silver was performed by UV spectroscopy, X-ray diffraction, Fourier Transform Infrared spectroscopy and Scanning Electron Microscopy. The peak at 420 nm showed the presence of nanoparticles in the solution and the crystal nature of the particle was identified by the XRD. FTIR characterised the functional harveyi biomolecules and further SEM confirmed the size of the nanoparticles around 24 ± 2.4 nm. Experimental pathogenicity of V. harveyi showed 100% mortality at the 120th hour. Treatment of encapsulated AgNPs was administered orally for the relative percentage of survival which acquired almost 90% of survival till 30 days of exposure. In conclusion, the microencapsulation of AgNPs in the biopolymer matrices promotes the health, growth responses, immunity and disease resistance of encapsulated AgNPs with an improved relative percentage of survival.

15.
Front Med (Lausanne) ; 8: 736978, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34733860

RESUMO

Parkinson's disease (PD), a neurodegenerative disorder characterized by distinct aging-independent loss of dopaminergic neurons in substantia nigra pars compacta (SNpc) region urging toward neuronal loss. Over the decade, various key findings from clinical perspective to molecular pathogenesis have aided in understanding the genetics with assorted genes related with PD. Subsequently, several pathways have been incriminated in the pathogenesis of PD, involving mitochondrial dysfunction, protein aggregation, and misfolding. On the other hand, the sporadic form of PD cases is found with no genetic linkage, which still remain an unanswered question? The exertion in ascertaining vulnerability factors in PD considering the genetic factors are to be further dissevered in the forthcoming decades with advancement in research studies. One of the major proponents behind the prognosis of PD is the pathogenic transmutation of aberrant alpha-synuclein protein into amyloid fibrillar structures, which actuates neurodegeneration. Alpha-synuclein, transcribed by SNCA gene is a neuroprotein found predominantly in brain. It is implicated in the modulation of synaptic vesicle transport and eventual release of neurotransmitters. Due to genetic mutations and other elusive factors, the alpha-synuclein misfolds into its amyloid form. Therefore, this review aims in briefing the molecular understanding of the alpha-synuclein associated with PD.

16.
Saudi J Biol Sci ; 28(9): 5168-5174, 2021 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-34466094

RESUMO

Our review focused on nanomaterials-based toxicity evaluation and its exposure to the human and aquatic animals when it was leached and contaminated in the environment. Ecotoxicological assessment and its mechanism mainly affect the skin covering layers and its preventive barriers that protect the foreign particles' skin. Nanoscale materials are essential in the medical field, especially in biomedical and commercial applications such as nanomedicine and drug delivery, mainly in therapeutic treatments. However, various commercial formulations of pharmaceutical drugs are manufactured through a series of clinical trials. The role of such drugs and their metabolites has not met the requirement of an individual's need at the early stage of the treatments except few drugs and medicines with minimal or no side effects. Therefore, biology and medicines are taken up the advantages of nano scaled drugs and formulations for the treatment of various diseases. The present study identifies and analyses the different nanoparticles and their chemical components on the skin and their effects due to penetration. There are advantageous factors available to facilitate positive and negative contact between dermal layers. It creates a new agenda for an established application that is mainly based on skin diseases.

17.
Saudi J Biol Sci ; 28(6): 3607-3615, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-34121904

RESUMO

BACKGROUND: Exosomes are nano-sized membrane vesicles, secreted by different types of cells into the body's biological fluids. They are found in abundance in semen as compared to other fluids. Exosomes contain a cargo of lipid molecules, proteins, phospholipids, cholesterol, mRNAs, and miRNAs. Each molecule of seminal exosomes (SE) has a potential role in male reproduction for childbirth. Many potential candidates are available within the seminal exosomes that can be used as diagnostic markers for various diseases or syndromes associated with male reproduction. Also these seminal exospmes play a major role in female reproductive tract for effective fertilization. AIM: The aim of this review is to focus on the advancement of human seminal exosomal research and its various properties. METHODS: We used many databases like Scopus, Google scholar, NCBI-NLM and other sources to filter the articles of interest published in exosomes. We used phrases like "Exosomes in human semen", "Composition of exosomes in human semen" and other relevant words to filter the best articles. RESULTS: Seminal exosomes play a major role in sperm functions like cell-to-cell communication, motility of the sperm cells, maintaining survival capacity for the sperm in the female reproductive tract and spermatogenesis. Also, seminal exosomes are used as a carrier for many regulatory elements using small RNA molecules. miRNAs of the seminal exosomes can be used as a diagnostic marker for prostate cancer instead of prostate specific antigen (PSA). Epididymosomes can be used as a biomarker for reproductive diseases and male infertility. CONCLUSION: Seminal exosomes could be used as biological markers for various reproductive disorders, male infertility diagnosis, and it can be used in anti-retroviral research for the identification of novel therapeutics for HIV-1 infection and transmission.

18.
Front Chem ; 9: 753146, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34988060

RESUMO

Protein misfolding occurs due to the loss of native protein structure and adopts an abnormal structure, wherein the misfolded proteins accumulate and form aggregates, which result in the formation of amyloid fibrils that are associated with neurodegenerative diseases. Amyloid beta (Aß42) aggregation or amyloidosis is contemplated as a unique hallmark characteristic of Alzheimer's disease (AD). Due to aberrant accrual and aggregation of Aß42 in extracellular space, the formation of senile plaques is found in AD patients. These senile plaques occur usually in the cognitive and memory region of the brain, enfeebles neurodegeneration, hinders the signaling between synapse, and disrupts neuronal functioning. In recent years, herbal compounds are identified and characterized for their potential as Aß42 inhibitors. Thus, understanding their structure and molecular mechanics can provide an incredible finding in AD therapeutics. To describe the structure-based molecular studies in the rational designing of drugs against amyloid fibrils, we examined various herbal compounds that belong to prenylflavonoids. The present study characterizes the trends we identified at molecular docking studies and dynamics simulation where we observed stronger binding orientation of bavachalcone, bavachin, and neobavaisoflavone with the amyloid-beta (Aß42) fibril structure. Hence, we could postulate that these herbal compounds could be potential inhibitors of Aß42 fibrils; these anti-aggregation agents need to be considered in treating AD.

19.
Int J Biol Macromol ; 164: 735-747, 2020 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-32693129

RESUMO

One of the major causes of varicocele is nitrosative stress. Two genes namely arginase 2 (ARG2) and nitric oxide synthase 1 (NOS1) are important in the mechanism of nitric oxide (NO) in the body. Semen samples from three different categories were taken, fertile (n = 20), Infertile (n = 20), and unilateral varicocele (n = 15). Quantitative estimation of ARG2 and NOS1 was carried out through the ELISA kit method. t-Test and ANOVA were calculated using Graphpad Prism. For the in silico analysis, the sequence of the proteins obtained from dbSNP was used in online tools such as nsSNPAnalyzer, PolyPhen-2, Fathmm, I-Mutant 2.0, SNPs&GO, PhD-SNP, PANTHER, SNAP2, PROVEAN, SIFT, and SNPeffect for screening deleterious mutants. These mutants were further evaluated with Swiss PDB and PyMOL for recording energy minimization, Root mean square deviation (RMSD) value, TM score, Hydrogen bonding, and Comparative modeling. Further, ConSurf, Netsurf, and STRING tools were used for evaluating conserved regions, stability, and protein-protein interactions respectively. The results of ARG2 protein were, fertile = 0.168 ± 0.007 U/ml, infertile = 0.201 ± 0.004 U/ml and, varicocele = 0.092 ± 0.002 U/ml. Results of NOS1 protein were fertile = 32.61 ± 2.8 nM/mg, infertile = 19.33 ± 3.7 nM/mg and, varicocele = 54.74 ± 4.8 nM/mg. From statistical analysis, the parameters were highly significant. From the in silico retrieved data, there were 130 and 499 nsSNPs (non-synonymous SNP) in ARG2 and NOS1 respectively. After screening with online tools, 6 deleterious nsSNPs each of ARG2 and NOS1 were considered for analysis through Swiss PDB. FoldX result of A52P mutant (ConSurf score = 9) of ARG2 was found to severely affect protein stability and that of A363T mutant (ConSurf score = 9) of NOS1 revealed a structural change. A52P had a higher RMSD value and A363T of NOS1 developed a new H-bond with 580th position. In varicocele cases, the ARG2 protein is found in lower quantity. The A52P variant of this protein can cause dysfunction and induce nitrosative stress. However, in infertile cases, NOS1 protein is found in lower quantity and the A363T variant can result in a decrease in NO leading to other forms of infertility.


Assuntos
Arginase/genética , Predisposição Genética para Doença , Óxido Nítrico Sintase Tipo I/genética , Varicocele/genética , Adulto , Sítios de Ligação , Biologia Computacional , Fertilidade/genética , Humanos , Infertilidade/genética , Infertilidade/patologia , Masculino , Mutação , Estresse Nitrosativo/genética , Polimorfismo de Nucleotídeo Único/genética , Sêmen/metabolismo , Varicocele/patologia , Adulto Jovem
20.
Int J Biol Macromol ; 146: 946-958, 2020 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-31730983

RESUMO

Extracellular vesicles (EVs) are gaining attention among the cell biologists and researchers over the last two decades. Prostasomes are considered to be (Evs) secreted by prostate epithelial cells into the semen during emission or ejaculation. Prostasomes contain various proteins required for immune regulation namely, amino and dipeptidyl peptidase; endopeptidase (neutral); decay accelerating factor; angiotensin-converting enzyme. Sperm cells need a few prerequisites in order to fertilize the egg. The role of prostasomes in enhancing the male fertility was reviewed extensively throughout the manuscript. Also, prostasomes have an immunosuppressive, immunomodulatory, antibacterial role in the female reproductive tract, and in some cases they can be used as immunocontraceptive agent to regulate the fertility status. This review will give insights to many active researchers in the field of prostasomal research and male infertility/fertility research. This review will open many unanswered mechanisms of prostasomes with respect to structure-function analysis, fatty acids patterns in diagnosis as well as prognosis of male infertility/fertility. More scientific reports are in need to support the mechanism of prostasomes and its role in immunomodulation. The development of prostasomes as a biomarker for the prostate cancer is still miserable with a lot of controversial results by various researchers.


Assuntos
Vesículas Extracelulares/metabolismo , Infertilidade Masculina/metabolismo , Próstata/metabolismo , Neoplasias da Próstata/metabolismo , Antioxidantes/metabolismo , Humanos , Infertilidade Masculina/imunologia , Masculino , Neoplasias da Próstata/imunologia , Espermatozoides/metabolismo
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